Molecular Dynamics Storm Software

  • BrennerMD is a public domain Fortran molecular dynamics program by Donald Brenner and other people. This project is to maintain the original source code and to build a Python interface on top of. ...

    • brennerc-in-fungimol-0.5.0.t ar.gz
    • brennermd
    • Freeware (Free)
    • 255 Kb
    • BSD; Linux
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  • Mdxvu is a C code program for Linux, Un*x and Win32/Cygwin. It analyses molecular structures and molecular dynamics (MD) trajectories from the AMBER, GROMACS, TINKER and DISCOVER (TM) programs. Simple graphics are provided by using the X11/XLIB. ...

    • mdxvu_april2008_v2.tar.gz
    • mdxvu
    • Freeware (Free)
    • 2.85 Mb
    • N/A
  • PFMD performs a Molecular Dynamics simulation of some polarizable fluids at the liquid state by means of a dissociable potential. Supported molecules are H2O (water) and MX3, where M is a metal among Al, Fe, or Ga and X is a halogen among Cl, Br, or. ...

    • pfmd-1.0RC2.tar.gz
    • pfmd
    • Freeware (Free)
    • 348 Kb
    • Windows; Mac; Linux
  • ProtoMol is an object-oriented component based framework for molecular dynamics ProtoMol is an object-oriented component based framework for molecular dynamics simulations..

    • ProtoMol-3.3.0-Windows-32bit .zip
    • protomol
    • Freeware (Free)
    • 12.59 Mb
    • Windows; BSD; Solaris; Linux
  • Fumody, is a program for work with XYZ file types, have two principal lines for xyz file types, one is for more general XYZ file options as a utility for rescaled, center, informations, etc. and other line more specifically for analysis configurations.

    • Freeware (Free)
    • Windows
  • The Molecular Modeling Templates, MMT is a C++ class library for molecular simulation applications. MMT serves as a code basis that can be easily extended and modified to perform Monte Carlo and molecular dynamics simulations.

    • Freeware (Free)
    • Windows
  • Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or. ...

    • Freeware (Free)
    • 5.2 Mb
    • WinXP, Windows Vista, Windows 7 x64
  • Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or. ...

    • Freeware (Free)
    • 3.6 Mb
    • Mac OS X
  • Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or. ...

    • Freeware (Free)
    • 4.1 Mb
    • WinXP, Windows Vista, Windows 7
  • Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or. ...

    • Freeware (Free)
    • 3.3 Mb
    • Linux
  • Ascalaph Designer 1.7.10 can actually provide the methods to build and edit molecular models, geometry optimization, and molecular dynamics simulations. Major Features:Molecular graphicsMultiple windowsTwo cameras per modelCPK, Wire frame, Stick,. ...

    • GPL ($)
    • 71.9 Mb
    • Windows XP , Vista , 7
  • Biskit is a python library for structural bioinformatics research. It simplifies the analysis of macromolecular structures, protein complexes, and molecular dynamics trajectories and offers a platform for the rapid integration of external. ...

    • biskit-2.4.0.tar.gz
    • biskit
    • Freeware (Free)
    • 19.3 Mb
    • BSD; Linux

Related:  Molecular Dynamics Storm - Molecular Dynamics Inc - Temperature Molecular Dynamics - Molecular Dynamics Wiki - Molecular Dynamics Study

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