NcRNA Mapper v.1.0

Advertisement
Advertisement

ncRNA Mapper is a computer program that gives more insight in the localization of sequencing fragments.

Given that sequencing of RNA gives reads at fixed base-positions, ncRNA Mapper analyzes the alignments (generated by Short Sequence Location Mapper; SSLM) by: visualizing them, retrieving the conservation of each given nucleotide, predicting the folding (done by centroid_fold), calculating how conserved the fragment is relative to the whole RNA sequence

The input that is required to accomplish these methods is SSLM-data, the RNA file where SSLM is based on, and an internet connection to download the conservation tracks.

Get ncRNA Mapper and try it for yourself to fully assess its capabilities!

ncRNA Mapper is a computer program that gives ... ncRNA Mapper is a computer program that gives more insight in the localization of sequencing fragments. Given that sequencing of RNA gives reads at fixed base-positions, ncRNA Mapper analyzes the alignments (generated by Short Sequence Location ...

ncrna mapper, rna sequence mapper, alignment visualization, fasta analysis, rna sequence, fasta, analyzer

 
  • NcRNA Mapper
  • 1.0
  • 11 Jun 12
  • Youri Hoogstrate
  • Windows All
  • Freeware
  • 159
  • Free
 
 

Review NcRNA Mapper

  • captcha
 
 
New 3D Modeling & CAD software
  • LT_SCALE AutoCAD add ons  v.1.2LT_SCALE is an add-on for AutoCAD with new commands for scale modification for LINETYPE and HATCH, registration of mileage in BLOCKs, modification of longitudinal profiles, cut and fill volume, 3D axis and roadside starting from 2D.
  • DreamPlan Home Edition  v.4.31DreamPlan Home Edition for Windows is an easy to use software. See your dream floor plan with customized kitchens, bathrooms and bedrooms for a home or apartment. Plan out your landscape. Customize paint, textures and decorations.
  • CADopia Professional  v.19.1.1.2033.0CADopia 19 includes DWG 2018 support, User Interface update, Support for Digital Signature, New Layer Manager Palette, Push & Pull solid editing, usability improvements, many utility tools, including all the features of the previous releases.
  • Home Plan Pro  v.5-7-11Many CAD programs are designed for architects and engineers. Thesecan be expensive, as well as hard to learn, and difficult to use. Home Plan Pro is designed to quickly and easily draw good-quality, straightforward designs.
  • ConCyl  v.2.3ConCyl computes the stress state for a system of concentric cylinders under combined pressure and thermal loading. The application includes a plotting interface to Excel, a design optimizater and detailed instructions that feature verification ...
  • Short Sequence Location Mapper  v.1.0Short Sequence Location Mapper loads the sequences, then aligns them and finally graphs and tables can be generated for one or more datasets at the same time. SSLM typically works with a BLAST data output file of short Solexa reads mapped to RNA ...