Virtual Dj Novo Software


  • A solution of de novo assembly for the 2rd generation sequencing.

    • Freeware (Free)
    • Windows
  • de novo genome assembly is now a challenge because of the overwhelming amount of data produced by sequencers. Ray assembles reads obtained with new sequencing technologies (Illumina, 454, SOLiD) using MPI 2.2 -- a message passing inferface. ...

    • Freeware (Free)
    • 416 Kb
    • BSD; Linux
  • PortalGen is the product of NOVO | Giant Steps experience developing and deploying BEA WebLogic Portal solutions; it facilitates the development, assembly, and deployment of portal solutions in a consistent and repeatable manner.

    • Freeware (Free)
    • Windows
  • Sequencing technologies, such as Illumina sequencing, provide the sequences of short "reads" of DNA that come from random positions on the genome. These reads then must be assembled de-novo into the original genome, or, if there is ...

    • Freeware (Free)
    • Windows
  • LutefiskXP is ANSI C compliant software used to perform de novo peptide sequencing from tandem mass LutefiskXP is ANSI C compliant software used to perform de novo peptide sequencing from tandem mass spectra..

    • Freeware (Free)
    • 773 Kb
    • Windows; Mac; Solaris
  • Using super-fast, integrated, high-performance computing algorithms, CLC Genomics Workbench sets a new standard for desktop based reference assembly and de novo assembly of SOLiD, Solexa, 454, and Helicos sequencing data# De novo assembly of Sanger,. ...

    • CLC Genomics Workbench for Mac OS
    • CLC bio
    • Freeware (Free)
    • 55 Mb
    • Mac OS X 10.4 or later
  • MetaPepSeq is metaserver for protein identification in Mass Spectrometry Experiments. It helps joining the power of Mascot and de novo sequencing algorithms by merging together into one. ...

    • metaPepSeq_0.8beta.zip
    • metapepseq
    • Freeware (Free)
    • 9 Kb
    • Windows
  • mPUMA: microbial Profiling Using Metagenomic Assembly This is a software package which was designed to allow researchers to profile microbial communities using a de novo assembly approach to form Operational Taxonomic Units (OTUs). While ...

    • Freeware (Free)
    • 45.59 Mb
    • BSD; Linux
  • Next-Gen Scaffolder is a scaffolder for de novo genome assembly projects, taking contigs and paired end libraries toproduce high-quality scaffolds. It is compatible with 454 reads..

    • scaffolds-r52.tar.bz2
    • scaffolds
    • Freeware (Free)
    • 74 Kb
    • BSD; Linux
  • This is an approach that complements previous methods for reliable homozygous structural variation identification. Our approach accurately determines genotype and breakpoints relative to a reference genome based on de novo assembly of Illumina Genome ...

    • Freeware (Free)
    • 6.02 Mb
    • BSD; Mac; Linux
  • VCAKE is a genetic sequence assembler capable of assembling millions of small nucleotide reads even in the presence of sequencing error. This software is currently geared towards de novo assembly of Illumina's Solexa Sequencing. ...

    • AssemblyPipeline_1.1.tar.gz
    • vcake
    • Freeware (Free)
    • 102 Kb
    • Windows; Mac; Linux
  • OLego is a program specifically designed for de novo spliced mapping of mRNA-seq reads. OLego adopts a seeding and extension scheme, and does not rely on a separate external mapper. It achieves high sensitivity of junction detection by using very ...

    • Freeware (Free)
    • 291 Kb
    • BSD; Mac; Linux

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